run_mapping_accuracy_comparison: Run scmap over a range of parameters, over multiple gene sets
In YutongWangUMich/corgi: CORGI: Curve-fit Objective Ranking of Gene Importance.
Description
Run scmap over a range of parameters, over multiple gene sets
Usage
1
2
run_mapping_accuracy_comparison(query, reference, gene_sets,
method_use = "scmapCluster")
Arguments
query
a SingleCellExperiment object for the query dataset
reference
a SingleCellExperiment object for the reference dataset
gene_sets
a named list of gene sets
method_use
a string denoting whether to use scmapCluster or scmapCell
YutongWangUMich/corgi documentation built on Oct. 26, 2019, 1:13 p.m.
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Description
Run scmap over a range of parameters, over multiple gene sets
Usage
1 2 | run_mapping_accuracy_comparison(query, reference, gene_sets,
method_use = "scmapCluster")
|
Arguments
query |
a SingleCellExperiment object for the query dataset |
reference |
a SingleCellExperiment object for the reference dataset |
gene_sets |
a named list of gene sets |
method_use |
a string denoting whether to use scmapCluster or scmapCell |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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