corgi: The user friendly version of corgi

Description Usage Arguments Value

View source: R/run_corgi.R

Description

The user friendly version of corgi

Usage

1
2
corgi(X, Y, run_time = 2 * 60 * 60, must_have_genes = c(), k = 3,
  fast = T)

Arguments

X

gene-by-cell expression matrix for batch 1

Y

gene-by-cell expression matrix for batch 2

run_time

how long to run for

must_have_genes

the set of marker genes that is used in every sampled gene set

Value

a list of scores


YutongWangUMich/corgi documentation built on Oct. 26, 2019, 1:13 p.m.