Files in abelew/Rerrrt
Examine RT error rates through sequencing.
.gitignore
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/01_errRt.r
R/classify.r
R/count_mutation_types.r
R/create_matrices.r
R/dna_convert.r
R/error_rate.r
R/expand_mutations.r
R/filters.r
R/matrices.r
R/normalize_matrices.r
R/plots.r
R/quantify_parsed.r
R/read_preprocessing.r
R/write_matrices.r
README.md
inst/doc/error_quantification.R
inst/doc/error_quantification.Rmd
inst/doc/error_quantification.html
inst/doc/reference.pdf
inst/extdata/all_samples.xlsx
inst/extdata/s1/step2_identical_reads.txt.xz
inst/extdata/s1/step4.txt.xz
inst/extdata/s2/step2_identical_reads.txt.xz
inst/extdata/s2/step4.txt.xz
inst/extdata/s3/step2_identical_reads.txt.xz
inst/extdata/s3/step4.txt.xz
inst/reference/reference.pdf
man/add_index_densities.Rd
man/barplot_matrices.Rd
man/classify_sequences.Rd
man/count_mutation_direction.Rd
man/count_mutation_types.Rd
man/create_matrices.Rd
man/errRt.Rd
man/expand_mutation_string.Rd
man/filter_max_mutations.Rd
man/filter_max_position.Rd
man/filter_min_position.Rd
man/filter_ns.Rd
man/filter_proportion.Rd
man/filter_pruned_indexes.Rd
man/make_index_table.Rd
man/matrices_from_tables.Rd
man/normalize_matrices.Rd
man/pipe.Rd
man/plot_index_density.Rd
man/prune_indexes.Rd
man/quantify_parsed.Rd
man/sequencer_error.Rd
man/write_legend_sheet.Rd
man/write_matrices.Rd
man/write_matrix_sheet.Rd
vignettes/error_quantification.Rmd
vignettes/experimental_design.svg
