aertslab/SCopeLoomR: Build .loom files (compatible with SCope) and extract data from .loom files.

R package to build generic .loom files aligning with the default naming convention of the .loom format and to integrate other data types e.g.: regulons (SCENIC), clusters from Seurat, trajectory information... The package can also be used to extract data from .loom files.

Getting started

Package details

Authordweemx
Maintainerdweemx <mdewaegeneer@gmail.com>
LicenseApache-2
Version0.13.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("aertslab/SCopeLoomR")
aertslab/SCopeLoomR documentation built on April 19, 2022, 11:25 a.m.