add_fbgn: add_fbgn
In aertslab/SCopeLoomR: Build .loom files (compatible with SCope) and extract data from .loom files.
add_fbgn R Documentation
add_fbgn
Description
Add the Flybase gene as a row attribute to the given .loom file handler.
Usage
add_fbgn(loom, dgem, fbgn.gn.mapping.file.path)
Arguments
loom
The loom file handler.
dgem
A matrix of the gene expression with M genes as rows and N cells as columns.
fbgn.gn.mapping.file.path
A N-by-2 data.frame containing the mapping between the Flybase gene and the gene symbol.
aertslab/SCopeLoomR documentation built on April 19, 2022, 11:25 a.m.
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| add_fbgn | R Documentation |
add_fbgn
Description
Add the Flybase gene as a row attribute to the given .loom file handler.
Usage
add_fbgn(loom, dgem, fbgn.gn.mapping.file.path)
Arguments
loom |
The loom file handler. |
dgem |
A matrix of the gene expression with M genes as rows and N cells as columns. |
fbgn.gn.mapping.file.path |
A N-by-2 data.frame containing the mapping between the Flybase gene and the gene symbol. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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