API for aib-group/PFP
Pathway Fingerprint Framework in R
| Global functions | |
|---|---|
| .check.PFP | Source code |
| .check.PFPRefnet | Source code |
| PFP | Man page |
| PFP-class | Man page |
| PFPRefnet-class | Man page |
| PFPRefnet_hsa | Man page |
| PFPRefnet_mmu | Man page |
| PFP_score | Man page |
| PFP_score,PFP-method | Man page |
| PFP_score-methods | Man page |
| PFP_test1 | Man page |
| PFP_test2 | Man page |
| calc_PFP_score | Man page Source code |
| data_std | Man page |
| gene_list_hsa | Man page |
| genes_score | Man page |
| genes_score,PFP-method | Man page |
| genes_score-methods | Man page |
| get_PFPRefnet | Man page Source code |
| get_asso_net | Man page |
| get_bg_related_kegg | Man page |
| get_exp_cor_edges | Man page Source code |
| get_pathway_info | Man page Source code |
| group | Man page |
| group,PFPRefnet-method | Man page |
| group-methods | Man page |
| kegg_download | Man page Source code |
| net_info | Man page |
| net_info,PFPRefnet-method | Man page |
| net_info-methods | Man page |
| net_names | Man page |
| net_names,PFPRefnet-method | Man page |
| net_names-methods | Man page |
| network | Man page |
| network,PFPRefnet-method | Man page |
| network-methods | Man page |
| pathway_info | Man page |
| pathway_info_hsa | Man page |
| pathways_score | Man page |
| pathways_score,PFP-method | Man page |
| pathways_score-method | Man page |
| pathways_score-methods | Man page |
| plot_PFP | Man page |
| plot_PFP,PFP-method | Man page |
| plot_PFP-methods | Man page |
| plot_PFPlist | Man page Source code |
| rank_PFP | Man page |
| rank_PFP,PFP-method | Man page |
| rank_PFP-methods | Man page |
| refnet_info | Man page |
| refnet_info,PFP-method | Man page |
| refnet_info-methods | Man page |
| refnet_names | Man page |
| refnet_names,PFP-method | Man page |
| refnet_names-methods | Man page |
| result_PFP | Man page |
| result_PFP,PFP-method | Man page |
| result_PFP-methods | Man page |
| show_PFP | Man page |
| show_PFP,PFP-method | Man page |
| show_PFP-methods | Man page |
| show_net | Man page |
| show_net,PFPRefnet-method | Man page |
| show_net-methods | Man page |
| stats_test | Man page |
| stats_test,PFP-method | Man page |
| stats_test-methods | Man page |
| sub_PFP | Man page |
| sub_PFP,PFP-method | Man page |
| sub_PFP-methods | Man page |
| subnet | Man page |
| subnet,PFPRefnet-method | Man page |
| subnet-methods | Man page |
| trans_edges_id | Man page |
| trans_graph2PFPRefnet | Man page Source code |
| trans_xml2graph | Man page Source code |
