trans_graph2PFPRefnet: translate graph_list to PFPRefnet class
In aib-group/PFP: Pathway Fingerprint Framework in R
Description
Usage
Arguments
Details
Value
Examples
View source: R/load_kegg_graphs.R
Description
This function will translate all graphs in graph_list to
a PFPRefnet-class object.
Usage
1
trans_graph2PFPRefnet(graph_list, pathway_info)
Arguments
graph_list,
a list of graphNEL.
pathway_info,
a data.frame, which contains all kegg pathways "index",
"id","name","group","species"
Details
translating all graphs in graph_list to a
PFPRefnet-class object.
The pathway_info can be designed by yourself, but the colnames must be
"index","id","name","group" and "species".
Value
a PFPRefnet
Examples
1
2
aib-group/PFP documentation built on Dec. 27, 2020, 1:13 a.m.
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Description Usage Arguments Details Value Examples
View source: R/load_kegg_graphs.R
Description
This function will translate all graphs in graph_list to
a PFPRefnet-class object.
Usage
1 | trans_graph2PFPRefnet(graph_list, pathway_info)
|
Arguments
graph_list, |
a list of |
pathway_info, |
a data.frame, which contains all kegg pathways "index", "id","name","group","species" |
Details
translating all graphs in graph_list to a
PFPRefnet-class object.
The pathway_info can be designed by yourself, but the colnames must be
"index","id","name","group" and "species".
Value
a PFPRefnet
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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