AnnotatePeak2: AnnotatePeak2

Description Usage Arguments Examples

View source: R/ChipSeq.R

Description

AnnotatePeak2

Usage

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AnnotatePeak2(input.file.dir, input.file.pattern, index.file, output.file.dir,
  genome)

Arguments

input.file.dir
input.file.pattern
index.file
output.file.dir
genome

Examples

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input.file.dir="/media/H_driver/2016/Danny/Danny_chip_PeakCall/"
input.file.pattern="*macs142_peaks.bed"
output.file.dir="/media/H_driver/2016/Danny/Danny_chip_PeakCall/"

AnnotatePeak(input.file.dir,input.file.pattern,8,output.file.dir,genome="Mm")
AnnotatePeak(input.file.dir,input.file.pattern,7,output.file.dir,genome="Hs")

aiminy/ChipSeq documentation built on Sept. 22, 2018, 9:10 a.m.