Description Usage Arguments Examples
Title
1 | ParserBedFile(dir.name, input.file.pattern, out.dir.name)
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input.file.pattern |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | dir.name="/media/H_driver/2016/Yang/BedFromPeakCall/"
input.file.pattern="*bam_mm_summits_from_PeakCall4Yang.bed"
out.dir.name="/media/H_driver/2016/Yang/Results/"
output.test.file= "SMC1A_RAD21_overlap_test"
dir.name.2="/media/H_driver/2016/Yang/BedFromPeakCall_mm_100e_07/"
input.file.pattern.2="*_bam_mm_1_from_PeakCall4Yang.bed"
out.dir.name.2="/media/H_driver/2016/Yang/Results/"
output.test.file.2= "SMC1A_RAD21_mm_100e-07_peaks_overlap_test"
ParserBedFile(dir.name,input.file.pattern,out.dir.name)
re.mm.100e.07<-ParserBedFile(dir.name.2,input.file.pattern.2,out.dir.name)
save.image(file=paste0(out.dir.name,"re_save_2.RData"))
savehistory(file=paste0(out.dir.name,"re_save_2.Rhistory"))
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