extractLargeScaleEvents: extractLargeScaleEvents()
In akdess/CaSpER: Identify large-scale CNV events from single cell or bulk RNA-Seq data
Description
Usage
Arguments
Value
Description
generates coherent set of large scale CNV events using the pairwise comparison of all scales from BAF and expression signals
Usage
1
extractLargeScaleEvents(final.objects, thr = 0.5)
Arguments
final.objects
casper object
thr
gamma threshold determining the least number of scales required to support
Value
final large scale event summary reported as a matrix
akdess/CaSpER documentation built on April 8, 2021, 8:59 a.m.
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Description Usage Arguments Value
Description
generates coherent set of large scale CNV events using the pairwise comparison of all scales from BAF and expression signals
Usage
1 | extractLargeScaleEvents(final.objects, thr = 0.5)
|
Arguments
final.objects |
casper object |
thr |
gamma threshold determining the least number of scales required to support |
Value
final large scale event summary reported as a matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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