plotGEAndBAFOneSample: plotGEAndBAFOneSample()

In akdess/CaSpER: Identify large-scale CNV events from single cell or bulk RNA-Seq data

Description

Gene expression and BAF signal for one sample in one plot

Usage

plotGEAndBAFOneSample(object, cnv.scale, loh.scale, sample, n = 50,
  scale.iteration = 50)

Arguments

object	casper object
cnv.scale	expression.scale for the expression signal
sample	sample name
n	window length used for median filtering
length.iterations	increase in window length at each scale iteration

akdess/CaSpER documentation built on April 8, 2021, 8:59 a.m.