extractMUAndCooccurence: extractMUAndCooccurence()
In akdess/CaSpER: Identify large-scale CNV events from single cell or bulk RNA-Seq data
Description
Usage
Arguments
Value
View source: R/utility_functions.R
Description
calculates significant mutually exclusive and co-occurent events
Usage
1
extractMUAndCooccurence(finalChrMat, loh, loh.name.mapping)
Arguments
finalChrMat
large scale event matrix generated using CaSpER
loh
original baf signal
loh.name.mapping
contains the cell (sample) name and the matching baf signal sample name
Value
list of mutually exclusive and co-occurent events
akdess/CaSpER documentation built on April 8, 2021, 8:59 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/utility_functions.R
Description
calculates significant mutually exclusive and co-occurent events
Usage
1 | extractMUAndCooccurence(finalChrMat, loh, loh.name.mapping)
|
Arguments
finalChrMat |
large scale event matrix generated using CaSpER |
loh |
original baf signal |
loh.name.mapping |
contains the cell (sample) name and the matching baf signal sample name |
Value
list of mutually exclusive and co-occurent events
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.