goEnrichmentBP: goEnrichmentBP()
In akdess/CaSpER: Identify large-scale CNV events from single cell or bulk RNA-Seq data
Description
Usage
Arguments
Value
Description
GO Term enrichment
Usage
1
2
goEnrichmentBP(genes, ontology, universe = character(0), pvalue = 0.05,
annotation = "org.Hs.eg.db", conditionalSearch = TRUE, genes2)
Arguments
genes
list of genes
ontology
ontology (BP, CC or MF)
universe
universe of genes
pvalue
pvalue cutoff
annotation
ontology annotation default:org.Hs.eg.db
Value
significantly enriched GO Terms
akdess/CaSpER documentation built on April 8, 2021, 8:59 a.m.
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Description Usage Arguments Value
Description
GO Term enrichment
Usage
1 2 | goEnrichmentBP(genes, ontology, universe = character(0), pvalue = 0.05,
annotation = "org.Hs.eg.db", conditionalSearch = TRUE, genes2)
|
Arguments
genes |
list of genes |
ontology |
ontology (BP, CC or MF) |
universe |
universe of genes |
pvalue |
pvalue cutoff |
annotation |
ontology annotation default:org.Hs.eg.db |
Value
significantly enriched GO Terms
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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