get_D_KL: Calculates the Kullback-Leibler divergence between...
In alexisvdb/singleCellHaystack: A Universal Differential Expression Prediction Tool for Single-Cell and Spatial Genomics Data
get_D_KL R Documentation
Calculates the Kullback-Leibler divergence between distributions.
Description
Calculates the Kullback-Leibler divergence between distributions.
Usage
get_D_KL(classes, parameters, reference.prob, pseudo)
Arguments
classes
A logical vector. Values are T is the gene is expressed in a cell, F is not.
parameters
Parameters of the analysis, as set by function 'get_parameters_haystack'
reference.prob
A reference distribution to calculate the divergence against.
pseudo
A pseudocount, used to avoid log(0) problems.
Value
A numerical value, the Kullback-Leibler divergence
alexisvdb/singleCellHaystack documentation built on Jan. 17, 2024, 10:45 a.m.
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| get_D_KL | R Documentation |
Calculates the Kullback-Leibler divergence between distributions.
Description
Calculates the Kullback-Leibler divergence between distributions.
Usage
get_D_KL(classes, parameters, reference.prob, pseudo)
Arguments
classes |
A logical vector. Values are T is the gene is expressed in a cell, F is not. |
parameters |
Parameters of the analysis, as set by function 'get_parameters_haystack' |
reference.prob |
A reference distribution to calculate the divergence against. |
pseudo |
A pseudocount, used to avoid log(0) problems. |
Value
A numerical value, the Kullback-Leibler divergence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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