Description Usage Arguments Value Author(s) References See Also Examples
View source: R/linkcomm_misc.R
This function returns a binary matrix with nodes as rows, communities as columns, and unit entries indicating membership in a community.
1 | getCommunityMatrix(x, nodes = head(names(x$numclusters), 20))
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x |
An object of class |
nodes |
A character vector containing the nodes for the community membership matrix. Defaults to the 20 (or less) nodes that belong to the most communities. |
A binary matrix with nodes as rows and communities as columns.
Alex T. Kalinka alex.t.kalinka@gmail.com
Kalinka, A.T. and Tomancak, P. (2011). linkcomm: an R package for the generation, visualization, and analysis of link communities in networks of arbitrary size and type. Bioinformatics 27, 2011-2012.
1 2 3 4 5 6 | ## Generate graph and extract link communities.
g <- swiss[,3:4]
lc <- getLinkCommunities(g)
## Get community membership matrix.
getCommunityMatrix(lc)
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