filter_genes: Filter genes in RNA-seq ExpressionSet
In alexvpickering/crossmeta: Cross Platform Meta-Analysis of Microarray Data
filter_genes R Documentation
Filter genes in RNA-seq ExpressionSet
Description
Uses filterByExpr to filter based on 'counts' assay or 'exprs'
assay if 'counts' isn't available (for ARCHS4 data).
Usage
filter_genes(eset)
Arguments
eset
ExpressionSet with 'counts' assayDataElement and group column in
pData
Value
filtered eset
See Also
filterByExpr
Examples
# example ExpressionSet
eset <- makeExampleCountsEset()
eset <- filter_genes(eset)
alexvpickering/crossmeta documentation built on May 23, 2024, 5:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| filter_genes | R Documentation |
Filter genes in RNA-seq ExpressionSet
Description
Uses filterByExpr to filter based on 'counts' assay or 'exprs' assay if 'counts' isn't available (for ARCHS4 data).
Usage
filter_genes(eset)
Arguments
eset |
ExpressionSet with 'counts' assayDataElement and group column in pData |
Value
filtered eset
See Also
filterByExpr
Examples
# example ExpressionSet
eset <- makeExampleCountsEset()
eset <- filter_genes(eset)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.