iqr_replicates: Removes features with replicated annotation.

In alexvpickering/crossmeta: Cross Platform Meta-Analysis of Microarray Data

Removes features with replicated annotation.

Description

For rows with duplicated annot, highested IQR retained.

Usage

iqr_replicates(eset, annot = "SYMBOL", rm.dup = FALSE)

Arguments

eset	Annotated eset created by load_raw.
annot	feature to use to remove replicates.
rm.dup	remove duplicates (same measure, multiple ids)? Used for Pathway analysis so that doesn't treat probes that map to multiple genes as distinct measures.

Value

Expression set with unique features at probe or gene level.

alexvpickering/crossmeta documentation built on May 23, 2024, 5:06 a.m.