iqr_replicates: Removes features with replicated annotation.
In alexvpickering/crossmeta: Cross Platform Meta-Analysis of Microarray Data
iqr_replicates R Documentation
Removes features with replicated annotation.
Description
For rows with duplicated annot, highested IQR retained.
Usage
iqr_replicates(eset, annot = "SYMBOL", rm.dup = FALSE)
Arguments
eset
Annotated eset created by load_raw.
annot
feature to use to remove replicates.
rm.dup
remove duplicates (same measure, multiple ids)? Used for Pathway analysis so that doesn't treat
probes that map to multiple genes as distinct measures.
Value
Expression set with unique features at probe or gene level.
alexvpickering/crossmeta documentation built on June 2, 2022, 7:06 a.m.
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| iqr_replicates | R Documentation |
Removes features with replicated annotation.
Description
For rows with duplicated annot, highested IQR retained.
Usage
iqr_replicates(eset, annot = "SYMBOL", rm.dup = FALSE)
Arguments
eset |
Annotated eset created by |
annot |
feature to use to remove replicates. |
rm.dup |
remove duplicates (same measure, multiple ids)? Used for Pathway analysis so that doesn't treat probes that map to multiple genes as distinct measures. |
Value
Expression set with unique features at probe or gene level.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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