dot-detectOntoDB: Detect ontology database from ontology ID.
In altintasali/ontoClust: Cluster Gene Ontology Terms
Description
Usage
Arguments
Value
Description
Checks ontology ID across "DO", "GO", "KEGG", "MKEGG" and "REACTOME" databases and returns the database name. This is the engine function for detectOntoDB and checks one entry at a time.
Usage
1
.detectOntoDB(ontology.id, NA.if.no.match = FALSE)
Arguments
ontology.id
A character vector with ontology IDs
NA.if.no.match
If an ID is not present across all databases, corresponding element of vector will be assigned as NA (default: TRUE). If FALSE, function will throw an error and stop.
Value
A character vector with the name of the databases.
altintasali/ontoClust documentation built on Dec. 19, 2021, 1:36 a.m.
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Description Usage Arguments Value
Description
Checks ontology ID across "DO", "GO", "KEGG", "MKEGG" and "REACTOME" databases and returns the database name. This is the engine function for detectOntoDB and checks one entry at a time.
Usage
1 | .detectOntoDB(ontology.id, NA.if.no.match = FALSE)
|
Arguments
ontology.id |
A character vector with ontology IDs |
NA.if.no.match |
If an ID is not present across all databases, corresponding element of vector will be assigned as NA (default: TRUE). If FALSE, function will throw an error and stop. |
Value
A character vector with the name of the databases.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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