getOntoClust: Get clusters of link communities
In altintasali/ontoClust: Cluster Gene Ontology Terms

Description Usage Arguments Value Examples

Get clusters of link communities

1	getOntoClust(lc, minClusterSize = 3, verbose = TRUE)

`lc`	Output of `getLC`
`minClusterSize`	Minimum number of members in a cluster. Default is 3.
`verbose`	Print detailed output. Default is TRUE.

A list object with

`mat`	Binary matrix. Rows: ontologies, columns: link communities
`ontoClust`	data.frame with columns of ontology IDs and link communities
`dist`	Distance matrix of `mat`
`hc`	`hclust` object

## Not run: 
ontology.id <- sample_data$GOBP$ID[1:100]
network <- createOntologyNetwork(ontology.id, method = "jaccard", weighted = FALSE)
lc <- getLC(network)
oc <- getOntoClust(lc)

## End(Not run)