onto2gene: Ontology ID to gene IDs

In altintasali/ontoClust: Cluster Gene Ontology Terms

Description

Ontology ID to gene IDs

Usage

onto2gene(id, organism = "hsa")

Arguments

id	ID of any ontology term
organism	Organism identifier (required for GO annotations). Default is "hsa". Currently human (hsa), mouse (mmu) and rat (rno) are supported. Full list of organism IDs can be found [here](https://www.genome.jp/kegg/catalog/org_list.html).

Value

A list object containing gene IDs for each ontology ID

Examples

## Not run: 
id <- lapply(sample_data, function(x){head(x$ID)})
id <- do.call(c, id)
onto2gene(id)

## End(Not run)

altintasali/ontoClust documentation built on Dec. 19, 2021, 1:36 a.m.