load_pseudo_mgi: Loads object with pseudo graph information
In babelomics/hipathia: HiPathia: High-throughput Pathway Analysis
load_pseudo_mgi R Documentation
Loads object with pseudo graph information
Description
Loads object with pseudo graph information
Usage
load_pseudo_mgi(species, group_by)
Arguments
species
Species of the samples.
group_by
How to group the subpathways to be visualized. By default
they are grouped by the pathway to which they belong. Available groupings
include "uniprot", to group subpathways by their annotated Uniprot functions,
"GO", to group subpathways by their annotated GO terms, and "genes", to group
subpathways by the genes they include.
#@examples
#load_pseudo_mgi("hsa", "uniprot")
Value
Pseudo graph information object
babelomics/hipathia documentation built on July 27, 2022, 2:23 p.m.
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| load_pseudo_mgi | R Documentation |
Loads object with pseudo graph information
Description
Loads object with pseudo graph information
Usage
load_pseudo_mgi(species, group_by)
Arguments
species |
Species of the samples. |
group_by |
How to group the subpathways to be visualized. By default they are grouped by the pathway to which they belong. Available groupings include "uniprot", to group subpathways by their annotated Uniprot functions, "GO", to group subpathways by their annotated GO terms, and "genes", to group subpathways by the genes they include. #@examples #load_pseudo_mgi("hsa", "uniprot") |
Value
Pseudo graph information object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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