path_vals: Pathways matrix of the BRCA gene expression dataset
In babelomics/hipathia: HiPathia: High-throughput Pathway Analysis
path_vals R Documentation
Pathways matrix of the BRCA gene expression dataset
Description
Matrix of pathway activation values for the BRCA dataset. This matrix is
extracted from the Results object returned by the hipathia function
by means of the get_paths_matrix function.
Usage
data(path_vals)
Format
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs
and column names are the TCGA identifyers of the samples.
Details
path_vals <- get_paths_matrix(results)
Value
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs
and column names are the TCGA identifyers of the samples.
babelomics/hipathia documentation built on July 27, 2022, 2:23 p.m.
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| path_vals | R Documentation |
Pathways matrix of the BRCA gene expression dataset
Description
Matrix of pathway activation values for the BRCA dataset. This matrix is
extracted from the Results object returned by the hipathia function
by means of the get_paths_matrix function.
Usage
data(path_vals)
Format
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.
Details
path_vals <- get_paths_matrix(results)
Value
Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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