AmatrixHD: The matrix A in the equation Ax=b for 1 haploid and 1 diploid...
In bahlolab/isoRelate: Identity-by-Descent Inference of Haploid Recombining Organisms
Description
The matrix A in the equation Ax=b for 1 haploid and 1 diploid chromosome
Usage
1
AmatrixHD(pop_allele_freqs, genotypes)
Arguments
pop_allele_freqs
A numeric vector of population allele frequencies for each SNP
genotypes
An integer matrix of genotype calls for a pair of isolates. Each coloumn represents and isolate and each row represents a SNP.
bahlolab/isoRelate documentation built on May 11, 2019, 5:25 p.m.
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Description
The matrix A in the equation Ax=b for 1 haploid and 1 diploid chromosome
Usage
1 | AmatrixHD(pop_allele_freqs, genotypes)
|
Arguments
pop_allele_freqs |
A numeric vector of population allele frequencies for each SNP |
genotypes |
An integer matrix of genotype calls for a pair of isolates. Each coloumn represents and isolate and each row represents a SNP. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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