calc_spatial_enrichment_matrix: calc_spatial_enrichment_matrix
In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox
Description
calculate spatial enrichment using a matrix approach
Usage
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calc_spatial_enrichment_matrix(
spatial_network,
bin_matrix,
adjust_method = "fdr",
do_fisher_test = TRUE,
do_parallel = TRUE,
cores = NA,
calc_hub = FALSE,
hub_min_int = 3
)
bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.
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Description
calculate spatial enrichment using a matrix approach
Usage
1 2 3 4 5 6 7 8 9 10 | calc_spatial_enrichment_matrix(
spatial_network,
bin_matrix,
adjust_method = "fdr",
do_fisher_test = TRUE,
do_parallel = TRUE,
cores = NA,
calc_hub = FALSE,
hub_min_int = 3
)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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