calculateMetaTableCells: calculateMetaTableCells
In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox
Description
Usage
Arguments
Value
Examples
Description
calculates the average metadata values for one or more (combined) annotation columns.
Usage
1
2
3
4
5
6
calculateMetaTableCells(
gobject,
value_cols = NULL,
metadata_cols = NULL,
spat_enr_names = NULL
)
Arguments
gobject
giotto object
value_cols
metadata or enrichment value columns to use
metadata_cols
annotation columns found in pDataDT(gobject)
spat_enr_names
which spatial enrichment results to include
Value
data.table with average metadata values per (combined) annotation
Examples
1
calculateMetaTableCells(gobject)
bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
calculates the average metadata values for one or more (combined) annotation columns.
Usage
1 2 3 4 5 6 | calculateMetaTableCells(
gobject,
value_cols = NULL,
metadata_cols = NULL,
spat_enr_names = NULL
)
|
Arguments
gobject |
giotto object |
value_cols |
metadata or enrichment value columns to use |
metadata_cols |
annotation columns found in pDataDT(gobject) |
spat_enr_names |
which spatial enrichment results to include |
Value
data.table with average metadata values per (combined) annotation
Examples
1 | calculateMetaTableCells(gobject)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.