amplifyTrans: Write out mediator-based trans-eSNP effects
In bhattacharya-a-bt/MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies
amplifyTrans R Documentation
Write out mediator-based trans-eSNP effects
Description
The function takes in the SNP-weights for mediators and
writes out the amplified SNP-weights based on
Usage
amplifyTrans(whichMed, medTrainList, lmCaretObj)
Arguments
geneInt
character, identifier for gene of interest
qtlFull
data frame, mediator-gene qtl results
numMed
numeric, user-defined maximum number of correlated mediators
Value
a vector of correlated biomarkers to be treated as mediators
bhattacharya-a-bt/MOSTWAS documentation built on April 6, 2023, 12:20 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| amplifyTrans | R Documentation |
Write out mediator-based trans-eSNP effects
Description
The function takes in the SNP-weights for mediators and writes out the amplified SNP-weights based on
Usage
amplifyTrans(whichMed, medTrainList, lmCaretObj)
Arguments
geneInt |
character, identifier for gene of interest |
qtlFull |
data frame, mediator-gene qtl results |
numMed |
numeric, user-defined maximum number of correlated mediators |
Value
a vector of correlated biomarkers to be treated as mediators
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.