visualize_continuous_discover: Visualization of the clustered network for the...
In biobakery/MMUPHin: Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies
View source: R/helpers_continuous_discover.R
visualize_continuous_discover R Documentation
Visualization of the clustered network for the continuous.discover function
Description
Visualization of the clustered network for the continuous.discover function
Usage
visualize_continuous_discover(graph_pc, membership_loading,
size_communities, plot_size_cutoff, short_names, output)
Arguments
graph_pc
the full pc network constructed from correlated PCs
membership_loading
membership of PC loadings from community discovery
size_communities
ordered (largest to smallest) size of the identified
communities
plot_size_cutoff
cluster size cutoff (for cluster to be included in
the visualized PC network)
short_names
shorter names of the loadings
output
output file name
Value
an invisible list of the subsetted network and memberships (to
reproduce the plot)
biobakery/MMUPHin documentation built on March 30, 2024, 4:50 a.m.
R Package Documentation
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View source: R/helpers_continuous_discover.R
| visualize_continuous_discover | R Documentation |
Visualization of the clustered network for the continuous.discover function
Description
Visualization of the clustered network for the continuous.discover function
Usage
visualize_continuous_discover(graph_pc, membership_loading,
size_communities, plot_size_cutoff, short_names, output)
Arguments
graph_pc |
the full pc network constructed from correlated PCs |
membership_loading |
membership of PC loadings from community discovery |
size_communities |
ordered (largest to smallest) size of the identified communities |
plot_size_cutoff |
cluster size cutoff (for cluster to be included in the visualized PC network) |
short_names |
shorter names of the loadings |
output |
output file name |
Value
an invisible list of the subsetted network and memberships (to reproduce the plot)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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