NEWS.md
In biobenkj/compartmentalizer: Higher-order chromatin domain inference in single samples from methylation arrays and single cells from scRNA-seq and scATAC-seq
compartmap 1.0.2
-
Modified the overall smoothing parameters for (sc)ATAC-seq compartments from k=5 to k=2 (corresponds to 5 bin smoothing)
-
Modifed which singular vector was returned from the right (PC-1) to the left
-
The right singular vector is now being used to return QC information regarding the compartments
compartmap 1.0.0
- compartmap is accepted and added to the 3.8 release of Bioconductor!
compartmap 0.1.0
- Initial addition of functions and tests
biobenkj/compartmentalizer documentation built on Oct. 13, 2023, 5:26 p.m.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
compartmap 1.0.2
-
Modified the overall smoothing parameters for (sc)ATAC-seq compartments from k=5 to k=2 (corresponds to 5 bin smoothing)
-
Modifed which singular vector was returned from the right (PC-1) to the left
-
The right singular vector is now being used to return QC information regarding the compartments
compartmap 1.0.0
- compartmap is accepted and added to the 3.8 release of Bioconductor!
compartmap 0.1.0
- Initial addition of functions and tests
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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