getShrinkageTargets: Get the specified samples to shrink towards instead of the...
In biobenkj/compartmentalizer: Higher-order chromatin domain inference in single samples from methylation arrays and single cells from scRNA-seq and scATAC-seq
View source: R/getShrinkageTargets.R
getShrinkageTargets R Documentation
Get the specified samples to shrink towards instead of the global mean
Description
Get the specified samples to shrink towards instead of the global mean
Usage
getShrinkageTargets(obj, group)
Arguments
obj
Input matrix
group
Samples/colnames to use for targeted shrinkage
Value
A matrix composed of samples to shrink towards
Examples
dummy <- matrix(rnorm(1000), ncol=25)
dummy.sub <- getShrinkageTargets(dummy, group = c(1,5,8,10))
biobenkj/compartmentalizer documentation built on Oct. 13, 2023, 5:26 p.m.
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View source: R/getShrinkageTargets.R
| getShrinkageTargets | R Documentation |
Get the specified samples to shrink towards instead of the global mean
Description
Get the specified samples to shrink towards instead of the global mean
Usage
getShrinkageTargets(obj, group)
Arguments
obj |
Input matrix |
group |
Samples/colnames to use for targeted shrinkage |
Value
A matrix composed of samples to shrink towards
Examples
dummy <- matrix(rnorm(1000), ncol=25)
dummy.sub <- getShrinkageTargets(dummy, group = c(1,5,8,10))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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