fixCompartments: Invert, or "fix", compartments that have a minimum confidence...

View source: R/fixCompartments.R

fixCompartmentsR Documentation

Invert, or "fix", compartments that have a minimum confidence score (1-min.conf)

Description

Invert, or "fix", compartments that have a minimum confidence score (1-min.conf)

Usage

fixCompartments(obj, min.conf = 0.8, parallel = FALSE, cores = 1)

Arguments

obj

Input RaggedExperiment or output of condenseSE

min.conf

Minimum confidence score to use

parallel

Whether to run in parallel

cores

How many cores to use if running in parallel

Value

A "fixed" set of compartments


biobenkj/compartmentalizer documentation built on Oct. 13, 2023, 5:26 p.m.