filterCompartments: Filter compartments using confidence estimates and eigenvalue...
In biobenkj/compartmentalizer: Higher-order chromatin domain inference in single samples from methylation arrays and single cells from scRNA-seq and scATAC-seq

filterCompartments

R Documentation

Filter compartments using confidence estimates and eigenvalue thresholds

Filter compartments using confidence estimates and eigenvalue thresholds

filterCompartments(obj, min.conf = 0.7, min.eigen = 0.02)

`obj`	Output of condenseSE or fixCompartments
`min.conf`	Minimum confidence estimate to use when filtering
`min.eigen`	Minimum absolute eigenvalue to use when filtering

A filtered/subset of the input object/list

biobenkj/compartmentalizer documentation built on Oct. 13, 2023, 5:26 p.m.

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