Files in biodosimetry-uab/biodosetools
Shiny App To Be Used By Biological Dosimetry Laboratories

.Rbuildignore
.github/.gitignore
.github/issue_template.md
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
CONTRIBUTORS.md
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md R/app_config.R R/app_server.R R/app_ui.R R/biodosetools-package.R R/calcs_aberrations.R R/calcs_decision_threshold.R R/calcs_estimation.R R/calcs_fitting.R R/calcs_translocations.R R/data.R R/golem_utils_server.R R/golem_utils_ui.R R/mod_estimation_dicent_ui.R R/mod_estimation_micro_ui.R R/mod_estimation_server.R R/mod_estimation_trans_ui.R R/mod_fitting_dicent_ui.R R/mod_fitting_micro_ui.R R/mod_fitting_server.R R/mod_fitting_trans_ui.R R/mod_help_server.R R/mod_trans_server.R R/run_app.R R/utils-md.R R/utils-pipe.R R/utils.R R/utils_estimation.R R/utils_fitting.R R/widgets.R README.Rmd README.md app.R
biodosetools.Rproj
data-raw/dna-content-table-ihgsc-raw.csv
data-raw/dna-content-table-morton-raw.csv
data-raw/dna_content_fractions.R data-raw/dna_fraction_tests.R data-raw/gardner_confidence_table.R
data/dna_content_fractions_ihgsc.rda
data/dna_content_fractions_morton.rda
data/gardner_confidence_table.rda
dev/01_start.R dev/02_dev.R dev/03_deploy.R dev/04_check.R
dev/app_file_manifest.txt
dev/coverage_hetero.Rmd dev/david-microniclei-data.Rmd dev/deploy_app.R dev/run_dev.R
inst/CITATION
inst/app/help/dicent/dose_error_methods.md inst/app/help/estimation/cases_data_input.md inst/app/help/estimation/cases_data_load.md inst/app/help/estimation/dose_assessment.md inst/app/help/estimation/dose_error.md inst/app/help/estimation/dose_exposure.md inst/app/help/estimation/dose_mixed_yields.md inst/app/help/estimation/fit_data_input.md inst/app/help/estimation/fit_data_load.md inst/app/help/estimation/fraction_coeff_select.md inst/app/help/fitting/count_data_aggregated.md inst/app/help/fitting/count_data_input.md inst/app/help/fitting/count_data_load.md inst/app/help/fitting/fitting_options_decision_thresholds.md inst/app/help/fitting/fitting_options_formula.md inst/app/help/fitting/fitting_options_model.md inst/app/help/micro/dose_error_methods.md inst/app/help/micro/fitting_options_model.md inst/app/help/save/estimation_data_save_report.md inst/app/help/save/fit_data_save.md inst/app/help/save/fit_data_save_report.md inst/app/help/trans/cases_data_confounders.md inst/app/help/trans/cases_data_input.md inst/app/help/trans/cases_data_load.md inst/app/help/trans/colors_data_input.md inst/app/help/trans/colors_data_input_b.md inst/app/help/trans/dose_error_methods.md inst/app/help/trans/fit_data_estimation.md inst/app/help/trans/fitting_options_decision_thresholds.md inst/app/reports/estimation-report-docx.Rmd inst/app/reports/estimation-report-pdf.Rmd inst/app/reports/fitting-report-docx.Rmd inst/app/reports/fitting-report-pdf.Rmd inst/app/reports/logo.pdf
inst/app/translations/translation_it.csv
inst/app/translations/translation_pl.csv
inst/app/translations/translations.R inst/app/www/about_body.md
inst/app/www/biodosetools_style.css
inst/app/www/contributors_app.md
inst/app/www/favicon-highres.png
inst/app/www/favicon.png
inst/app/www/home.svg
inst/app/www/icon_small.svg
inst/app/www/sass/compile_sass.R
inst/app/www/sass/main.scss
inst/app/www/sass/modules/boxes.scss
inst/app/www/sass/modules/buttons.scss
inst/app/www/sass/modules/checkboxes.scss
inst/app/www/sass/modules/config.scss
inst/app/www/sass/modules/custom.scss
inst/app/www/sass/modules/fixes.scss
inst/app/www/sass/modules/fontawesome.scss
inst/app/www/sass/modules/fonts.scss
inst/app/www/sass/modules/misc.scss
inst/app/www/sass/modules/modals.scss
inst/app/www/sass/modules/navbar.scss
inst/app/www/sass/modules/radiobuttons.scss
inst/app/www/sass/modules/sidebar.scss
inst/app/www/sass/modules/switches.scss
inst/extdata/cases-data-hetero.csv
inst/extdata/cases-data-partial.csv
inst/extdata/count-data-barquinero-1995-aggr.csv
inst/extdata/count-data-barquinero-1995.csv
inst/extdata/count-data-rodriguez-2004-aggr.csv
inst/extdata/count-data-rodriguez-2004.csv
inst/extdata/dicentrics-fitting-data-2020-10-10.rds
inst/extdata/micronuclei-fitting-data-2020-10-10.rds
inst/extdata/translocations-fitting-data-2020-10-10.rds
inst/golem-config.yml
man/AIC_from_data.Rd man/R_factor.Rd man/biodosetools.Rd man/calculate_aberr.Rd man/calculate_decision_threshold.Rd man/calculate_genome_factor.Rd man/calculate_model_stats.Rd man/calculate_trans_rate_manual.Rd man/calculate_trans_rate_sigurdson.Rd man/calculate_yield.Rd man/calculate_yield_infimum.Rd man/correct_boundary.Rd man/correct_conf_int.Rd man/correct_negative_vals.Rd man/correct_yield.Rd man/dna_content_fractions_ihgsc.Rd man/dna_content_fractions_morton.Rd man/estimate_hetero_mixed_poisson.Rd man/estimate_partial_body_dolphin.Rd man/estimate_whole_body_delta.Rd man/estimate_whole_body_merkle.Rd
man/figures/logo.png
man/fit.Rd man/fit_glm_method.Rd man/fit_maxlik_method.Rd man/gardner_confidence_table.Rd man/include_help.Rd man/load_rmd_report.Rd man/pipe.Rd man/plot_estimated_dose_curve.Rd man/plot_fit_dose_curve.Rd man/prepare_maxlik_count_data.Rd man/project_yield.Rd man/protracted_g_function.Rd man/run_app.Rd man/yield_error_fun.Rd man/yield_fun.Rd
pkgdown/_pkgdown.yml
pkgdown/compile_sass.R
pkgdown/extra.css
pkgdown/extra.scss
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
rsconnect/shinyapps.io/aldomann/biodosetools-v3.dcf
tests/testthat.R tests/testthat/test-decision-threshold.R tests/testthat/test-dicentrics.R tests/testthat/test-golem-additional.R tests/testthat/test-golem-recommended.R tests/testthat/test-init-tables.R tests/testthat/test-translocations.R tests/testthat/test-utils.R
biodosimetry-uab/biodosetools documentation built on Nov. 25, 2021, 1:14 p.m.