The only requirement for the data is to be in .csv
(or .txt
) format and two have the following structure:
CX
, where X
can 0, 1, 2, 3
...An example of how the data should be formatted can be seen below.
C0 ,C1,C2,C3,C4,C5
104,72,15,2 ,0 ,0
The rest of columns will be calculated automatically after clicking Calculate parameters:
N
is the total number of cells.X
is the number of aberrations.Fp
is the observed yield, and Fp_err
is its standard error.DI
is the dispersion index $\sigma^{2}/y$.u
is the $u$-value, which for a Poisson distribution should be unity.Xc
translocation frequency to be substracted from the observed yield.Fg
is the full genome yield, and Fg_err
is its standard error.Note that Fg
already takes into account the correction applied by the selected confounders.
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