compareLists: Comparing two lists of features

In biomics-pasteur-fr/RNADiff: R Tools for RNA-Seq Projects at Institut Pasteur (Biomics Platform)

Description

Comparing two lists of features (ordered by p-value or logFC...)

Usage

compareLists(listeA, listeB, main = "", labelA = NULL, labelB = NULL,
  choice = c("both", "curve", "venn"))

Arguments

listeA	a first vector of features
listeB	a second vector of features
main	common title of the two figures produced
labelA	label for list A
labelB	label for list B
choice	what to plot: curve, venn diagram or both

Value

A figure with a curve (left) and a Venn diagram (right)

Author(s)

Hugo Varet

Examples

listeA <- sort(sample(1:100,50,FALSE))
listeB <- sort(sample(1:100,50,FALSE))
compareLists(listeA,listeB)

listeA <- sort(sample(1:100,10,FALSE))
listeB <- sort(sample(1:100,10,FALSE))
compareLists(listeA,listeB)

listeA <- sort(sample(1:100,50,FALSE))
listeB <- sort(sample(1:100,80,FALSE))
compareLists(listeA,listeB)

listeA <- sort(sample(1:100,80,FALSE))
listeB <- sort(sample(1:100,30,FALSE))
compareLists(listeA,listeB)

biomics-pasteur-fr/RNADiff documentation built on Aug. 27, 2020, 12:44 a.m.