combinePATRICBlast: Combines PATRIC blast output files with metadata and PATRIC...

In blue-moon22/resistomeAnalysis: Resistome Analysis

Description

Combines PATRIC blast output files with metadata and PATRIC data

Usage

combinePATRICBlast(filenames, patric_headers, metadata_file, output_file)

Arguments

filenames	A character vector of bedtools filenames
patric_headers	A dataframe of the faa headers in the patric database
metadata_file	A string of the location of the metadata file
output_file	A string of the location of the output

blue-moon22/resistomeAnalysis documentation built on Jan. 17, 2020, 4:15 a.m.