R/data.R

In broadinstitute/CommunityAMARETTO: CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems

#' TCGA_LIHC_data
#'
#' A list containing data from an analysis for TCGA-LIHC.
#' The list include following objects: 1) AMARETTO_result calculated 
#' from AMARETTO analysis. 2) Phenotype Association analysis table. 
#'
#' @format List
#' @source \url{CommunityAMARETTO}
"TCGA_LIHC_data"

#' CCLE_Liver_data
#'
#' A list containing data from an analysis for CCLE-Liver.
#' The list include AMARETTO_result object calculated from AMARETTO
#' analysis.
#' 
#' @format List
#' @source \url{CommunityAMARETTO}
"CCLE_Liver_data"

#' MsigdbMapping
#'
#' Complementary data providing hyperlinks of Msigdb pages
#' 
#' @format List
#' @source \url{CommunityAMARETTO}
"MsigdbMapping"

#' scHCV_data
#'
#' A list containing data from an analysis for single cell HCV.
#' The list include AMARETTO_result object calculated from AMARETTO
#' analysis.
#' 
#' @format List
#' @source \url{CommunityAMARETTO}
"scHCV_data"

#' scHBV_data
#'
#' A list containing data from an analysis for single cell HBV.
#' The list include AMARETTO_result object calculated from AMARETTO
#' analysis.
#' 
#' @format List
#' @source \url{CommunityAMARETTO}
"scHBV_data"