set_obs: Set unstructured data

In bschilder/scKirby: Automated ingestion and conversion of various single-cell data formats.

Set unstructured data

Description

Set the sample observations slot (i.e. cell metadata) in any single-cell object that has one.

Usage

set_obs(obj, obs, verbose = TRUE)

Arguments

obj	A single-cell object supported by scKirby. See converters for a table of all supported conversions.
obs	Observation metadata as a data.frame with samples as row names.
verbose	Print messages.

Value

Single-cell object.

Examples

obj <- example_obj("ad")
obs <- get_obs(obj)
obs$new_col <- c(1,2)
obj2 <- set_obs(obj = obj,
                obs = obs)

bschilder/scKirby documentation built on April 22, 2024, 12:13 a.m.