seurat_to_se: Convert: 'Seurat' ==> 'SummarizedExperiment'
In bschilder/scKirby: Automated ingestion and conversion of various single-cell data formats.
seurat_to_se R Documentation
Convert: Seurat ==> SummarizedExperiment
Description
Convert: Seurat ==> SummarizedExperiment
Usage
seurat_to_se(obj, as_sce = TRUE, verbose = TRUE)
Arguments
obj
A single-cell object supported by scKirby.
See converters for a table of all supported conversions.
as_sce
Convert to a SingleCellExperiment
format.
verbose
Print messages.
Value
A SummarizedExperiment object.
Examples
obj <- example_obj("seurat")
obj2 <- seurat_to_se(obj)
bschilder/scKirby documentation built on April 22, 2024, 12:13 a.m.
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| seurat_to_se | R Documentation |
Convert: Seurat ==> SummarizedExperiment
Description
Convert: Seurat ==> SummarizedExperiment
Usage
seurat_to_se(obj, as_sce = TRUE, verbose = TRUE)
Arguments
obj |
A single-cell object supported by scKirby. See converters for a table of all supported conversions. |
as_sce |
Convert to a SingleCellExperiment format. |
verbose |
Print messages. |
Value
A SummarizedExperiment object.
Examples
obj <- example_obj("seurat")
obj2 <- seurat_to_se(obj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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