subset_variant_by_type: Subsets a variant table based on Variant Type

In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit

Subsets a variant table based on Variant Type

Description

Subsets a variant table based on Variant Type

Usage

subset_variant_by_type(tab, type)

Arguments

tab	Input variant table
type	Variant type to return e.g. "SBS", "INS", "DEL", "DBS"

Value

Returns the input variant table subsetted to only contain variants of the specified variant type

Examples

data(musica)
annotate_variant_type(musica)
subset_variant_by_type(variants(musica), "SBS")

campbio/musicatk documentation built on Oct. 22, 2023, 8:28 p.m.