Jackknife_cluster_stability: Get jackknifed cluster stability.

In caravagn/revolver: REVOLVER - Repeated Evolution in Cancer

Get jackknifed cluster stability.

Description

After jackknife computations via revolver_jackknife, this function extracts a cluster-specific stability obtained as the median co-clustering probability of the patients in the cluster.

Usage

Jackknife_cluster_stability(x)

Arguments

x	A REVOLVER cohort with fits, clusters and jackknife results.

Value

A named vector.

See Also

Other Jackknife statistics: Jackknife_patient_coclustering(), Jackknife_trajectories_stability()

Examples

# Data released in the 'evoverse.datasets'
data('TRACERx_NEJM_2017_REVOLVER', package = 'evoverse.datasets')

Jackknife_cluster_stability(TRACERx_NEJM_2017_REVOLVER)

caravagn/revolver documentation built on May 21, 2022, 5:48 p.m.