plot_drivers_occurrence: Plot the occurrence of drivers across the cohort.

In caravagn/revolver: REVOLVER - Repeated Evolution in Cancer

Plot the occurrence of drivers across the cohort.

Description

Plots a heatmap of the patients (x-axis) and driver events (y-axis), which helps visualizing in a simple fashion the mapping of drivers in the cohort.

Usage

plot_drivers_occurrence(x)

Arguments

x	A REVOLVER cohort.

Value

A 'ggplot' object of the plot.

See Also

Other Plotting functions: distinct_palette_few(), distinct_palette_many(), gradient_palette(), plot_DET_index(), plot_clusters(), plot_dendrogram(), plot_drivers_clonality(), plot_drivers_graph(), plot_jackknife_cluster_stability(), plot_jackknife_coclustering(), plot_jackknife_trajectories_stability(), plot_patient_CCF_histogram(), plot_patient_data(), plot_patient_mutation_burden(), plot_patient_oncoprint(), plot_patient_trees_scores()

Examples

# Data released in the 'evoverse.datasets'
data('TRACERx_NEJM_2017_REVOLVER', package = 'evoverse.datasets')

plot_drivers_occurrence(TRACERx_NEJM_2017_REVOLVER)

caravagn/revolver documentation built on May 21, 2022, 5:48 p.m.