BASiCS_Chain-methods: 'show' method for BASiCS_Chain objects

In catavallejos/BASiCS: Bayesian Analysis of Single-Cell Sequencing data

'show' method for BASiCS_Chain objects

Description

'show' method for BASiCS_Chain objects.

'updateObject' method for BASiCS_Chain objects. It is used to convert outdated BASiCS_Chain objects into a version that is compatible with the Bioconductor release of BASiCS. Do not use this method is BASiCS_Chain already contains a parameters slot.

Usage

## S4 method for signature 'BASiCS_Chain'
show(object)

## S4 method for signature 'BASiCS_Chain'
updateObject(object, ..., verbose = FALSE)

Arguments

object	A BASiCS_Chain object.
...	Additional arguments of updateObject generic method. Not used within BASiCS.
verbose	Additional argument of updateObject generic method. Not used within BASiCS.

Value

Prints a summary of the properties of object.

Returns an updated BASiCS_Chain object that contains all model parameters in a single slot object (list).

Author(s)

Catalina A. Vallejos [e-mail]

Nils Eling [e-mail]

Examples

Data <- makeExampleBASiCS_Data()
Chain <- BASiCS_MCMC(Data, N = 50, Thin = 2, Burn = 2, Regression = FALSE)


# Not run
# New_Chain <- updateObject(Old_Chain)

catavallejos/BASiCS documentation built on March 27, 2024, 12:49 a.m.