API for ccbiolab/svpluscnv
svpluscnv: analysis and visualization of complex structural variation data
| Global functions | |
|---|---|
| IQM | Man page Source code |
| IQSD | Man page Source code |
| amp.del | Man page |
| ave.segmean | Man page Source code |
| bed2chromo.reg | Man page Source code |
| break.annot | Man page |
| break.annot-class | Man page |
| break.density | Man page Source code |
| break.iqm | Man page |
| break.iqm-class | Man page |
| breaks | Man page |
| breaks-class | Man page |
| brk.burden.iqm | Man page Source code |
| chr.arm.cnv | Man page Source code |
| chr.sort | Man page Source code |
| chromo.regs | Man page |
| chromo.regs-class | Man page |
| chromosome.limit.coords | Man page Source code |
| circ.chromo.plot | Man page Source code |
| circ.wg.plot | Man page Source code |
| clean.cnv.artifact | Man page Source code |
| cnv.break.annot | Man page |
| cnv.breaks | Man page Source code |
| cnv.freq | Man page Source code |
| cnv_blacklist_regions | Man page |
| cnvfreq | Man page |
| cnvfreq-class | Man page |
| createRandomString | Man page Source code |
| d3gb.chr.lim | Man page Source code |
| dngr | Man page |
| extract.bins | Man page |
| extract.bins,chromo.regs-method | Man page |
| freq.p.test | Man page Source code |
| freq.threshold | Man page |
| freq.threshold,null.freq-method | Man page |
| gene.cnv | Man page Source code |
| gene.symbol.info | Man page |
| gene.symbol.info,refSeqDat-method | Man page |
| gene.track.view | Man page Source code |
| geneBreakOverlap | Man page Source code |
| genecnv | Man page |
| genecnv-class | Man page |
| get.chr.bins | Man page Source code |
| get.genesgr | Man page Source code |
| hbd.mat | Man page |
| hbd.mat,chromo.regs-method | Man page |
| hot.spot.samples | Man page Source code |
| map2color | Man page Source code |
| match.breaks | Man page Source code |
| med.segmean | Man page Source code |
| merge2lists | Man page Source code |
| nbl_segdat | Man page |
| nbl_svdat | Man page |
| null.freq | Man page |
| null.freq-class | Man page |
| pct.genome.changed | Man page Source code |
| refSeqDat | Man page |
| refSeqDat-class | Man page |
| refseq_hg19 | Man page |
| refseq_hg38 | Man page |
| segdat_lung_ccle | Man page |
| segment.gap | Man page Source code |
| shattered.eval | Man page Source code |
| shattered.map.plot | Man page Source code |
| shattered.regions | Man page Source code |
| shattered.regions.cnv | Man page Source code |
| sv.model.view | Man page Source code |
| svc.break.annot | Man page |
| svc.breaks | Man page Source code |
| svcnvio | Man page |
| svcnvio-class | Man page |
| svdat_lung_ccle | Man page |
| upgr | Man page |
| validate.cnv | Man page Source code |
| validate.svc | Man page Source code |
