Files in cdeterman/OmicsMarkeR

Classification and Feature Selection for 'Omics' Datasets

R/aggregation.R R/assert_functions.R R/bagging.wrapper.v2.R R/data.generation.R R/denovo.grid.R.R R/extract.args.R R/extract.features.v2.R R/feature.table.R R/fit.only.model.R R/fs.ensembl.stability.R R/fs.stability.v2.R R/misc.R R/modelList.R R/modelTuner.v2.R R/modelTuner_loo.R R/optimize.R R/params.R R/performance.R R/performance.metrics.R R/perm.class.R R/perm.features.R R/predictNewClasses.R R/predicting.R R/prediction.metrics.R R/sequester.R R/stability.R R/svm.functions.R R/training.R R/tune.instructions.R R/verify.R README.md inst/doc/OmicsMarkeR.R inst/doc/OmicsMarkeR.pdf inst/examples/RPT.R inst/examples/aggregation.R inst/examples/canberra.R inst/examples/data.generation.R inst/examples/denovo.grid.R inst/examples/feature.table.R inst/examples/fit.only.model.R inst/examples/fs.stability.R inst/examples/jaccard.R inst/examples/kuncheva.R inst/examples/ochiai.R inst/examples/pairwise.model.stability.R inst/examples/pairwise.stability.R inst/examples/params.R inst/examples/performance.metrics.R inst/examples/perm.class.R inst/examples/perm.features.R inst/examples/pof.R inst/examples/predictNewClasses.R inst/examples/sorensen.R inst/examples/spearman.R inst/examples/svmrfeFeatureRanking.R inst/examples/svmrfeFeatureRankingForMulticlass.R man/CLA.Rd man/EE.Rd man/EM.Rd man/ES.Rd man/RPT.Rd man/aggregation.Rd man/bagging.wrapper.Rd man/canberra.Rd man/canberra_stability.Rd man/create.corr.matrix.Rd man/create.discr.matrix.Rd man/create.random.matrix.Rd man/denovo.grid.Rd man/extract.args.Rd man/extract.features.Rd man/feature.table.Rd man/fit.only.model.Rd man/fs.ensembl.stability.Rd man/fs.stability.Rd man/jaccard.Rd man/kuncheva.Rd man/modelList.Rd man/modelTuner.Rd man/modelTuner_loo.Rd man/noise.matrix.Rd man/ochiai.Rd man/optimize.model.Rd man/pairwise.model.stability.Rd man/pairwise.stability.Rd man/params.Rd man/perf.calc.Rd man/performance.metrics.Rd man/performance.stats.Rd man/perm.class.Rd man/perm.features.Rd man/pof.Rd man/predictNewClasses.Rd man/predicting.Rd man/prediction.metrics.Rd man/sequester.Rd man/sorensen.Rd man/spearman.Rd man/svm.weights.Rd man/svmrfeFeatureRanking.Rd man/svmrfeFeatureRankingForMulticlass.Rd man/training.Rd man/tune.instructions.Rd tests/testthat.R tests/testthat/test_aggregation.R tests/testthat/test_data_generation.R tests/testthat/test_fs.ensembl.stability.R tests/testthat/test_fs.stability.R tests/testthat/test_stability_metrics.R