GAOptimizationObjFn: GAOptimizationObjFn
In cgab-ncc/FIREVAT: FIREVAT, FInding REliable Variants without ArTifacts
View source: R/firevat_optimization.R
GAOptimizationObjFn R Documentation
GAOptimizationObjFn
Description
Objective function for FIREVAT optimization
Usage
GAOptimizationObjFn(params.x, data)
Arguments
data
= A list with the following data
"vcf.obj"ReadVCF
"vcf.filter"a list
"vcf.calling.method"string value
"df.ref.mut.sig"a data.frame
"target.mut.sigs"a character vector
"sequencing.artifact.mut.sigs"a charcter vector
"config.obj"ParseConfigFile
string
= binary representation of parameter values
Value
A numeric value corresponding to the optimization objective value
cgab-ncc/FIREVAT documentation built on Nov. 19, 2022, 5:55 p.m.
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View source: R/firevat_optimization.R
| GAOptimizationObjFn | R Documentation |
GAOptimizationObjFn
Description
Objective function for FIREVAT optimization
Usage
GAOptimizationObjFn(params.x, data)
Arguments
data |
= A list with the following data
|
string |
= binary representation of parameter values |
Value
A numeric value corresponding to the optimization objective value
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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