getAffyData: Extract affymetrix expression data

Description Usage Arguments Value

Description

This function creates a data.frame containing the affymetrix gene expression data from the database for the requested cell lines and genes.

Usage

1
getAffyData(con, genes, cell_lines)

Arguments

con

A SQLiteConnection object to the database

genes

A vector of gene symbols

cell_lines

A vectore of cell line identifiers

Value

A data.frame containing the affymetrix gene expression data for the requested compounds and cell lines


chapmandu2/CancerCellLines documentation built on May 13, 2019, 3:27 p.m.