makeRespVsRespDataFrame: Make a RespVsResp data frame
In chapmandu2/CancerCellLines: Analysis of cancer cell line data
Description
Usage
Arguments
Value
Description
This function creates a data.frame containing the response data suitable for the RespVsResp plotting functions
Usage
1
2
makeRespVsRespDataFrame(con, drugs, cell_lines, resp_type = "ccle",
tissue_info = "ccle", drug_df = NULL)
Arguments
drugs
A vector of compound identifiers
cell_lines
A vector of cell line identifiers
resp_type
The type of response data: ccle, custom
tissue_info
Source of tissue information - see ?getTissueInfo
drug_df
A data.frame containing input for the getDrugData_custom function
src
A SQLiteConnection object to the database (ccle) or data.frame object (custom)
Value
A data.frame containing the response data for the requested compounds and cell lines
chapmandu2/CancerCellLines documentation built on May 13, 2019, 3:27 p.m.
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Description Usage Arguments Value
Description
This function creates a data.frame containing the response data suitable for the RespVsResp plotting functions
Usage
1 2 | makeRespVsRespDataFrame(con, drugs, cell_lines, resp_type = "ccle",
tissue_info = "ccle", drug_df = NULL)
|
Arguments
drugs |
A vector of compound identifiers |
cell_lines |
A vector of cell line identifiers |
resp_type |
The type of response data: |
tissue_info |
Source of tissue information - see ?getTissueInfo |
drug_df |
A |
src |
A |
Value
A data.frame containing the response data for the requested compounds and cell lines
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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