Man pages for charles-plessy/smallCAGEqc
ad-hoc QC functions for shallow-sequenced test CAGE libraries

bedFieldNamesbedFieldNames
chrFreqschrFreqs
countSymbolscountSymbols
erccSpikeConcentrationerccSpikeConcentration
exportInEnvexportInEnv
fldgmArrayQCfldgmArrayQC
fldgmChamberWellfldgmChamberWell
fldgmConcentrationPlotfldgmConcentrationPlot
fldgmPicoGreenfldgmPicoGreen
fldgmPicoGreenStdCurvefldgmPicoGreenStdCurve
hanabihanabi
hanabiPlothanabiPlot
hannothannot
hierarchAnnothierarchAnnot
is.singletonis.singleton
listSymbolslistSymbols
llPostProcessllPostProcess
loadBED12loadBED12
loadLogsloadLogs
loadMoiraiStatsloadMoiraiStats
mapStatsmapStats
nanoCAGE2017barcodes96 hexameric barcode sequences for sample indexing
plate96plate96
plotAnnotPlot annotation statistics
plot.hanabiplot.hanabi
plotNameColorplotNameColor
plotSlimSmearplotSlimSmear
points.hanabipoints.hanabi
ranges2annotranges2annot
ranges2genesranges2genes
setBlocksetBlock
setupForMoiraisetupForMoirai
smallCAGEqcsmallCAGEqc
TPMTPM
VennABVennAB
charles-plessy/smallCAGEqc documentation built on Jan. 28, 2018, 1:42 a.m.