Description Usage Arguments Value See Also Examples
Assign gene symbol(s) to Genomic Ranges.
1 | ranges2genes(ranges, genes)
|
ranges |
The Genomics Ranges object, for example extracted from a
RangedSummarizedExperiment object with the |
annot |
A Genomics Ranges object providing enough information for finding gene symbols. Typically GENCODE. |
A character vector of same length as the GRanges object, indicating one gene symbol or a comma-separated list of gene symbols for each range.
Other smallCAGEqc annotation functions: hannot
,
hierarchAnnot
, mapStats
,
plotAnnot
, ranges2annot
1 2 3 4 | ## Not run:
rowRanges(l1)$genes <- ranges2genes(rowRanges(l1), gff)
## End(Not run)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.