ProgenyMapping: Define a function to perform single-cell based hard porogeny...

In chenweng1991/scMitoTracing: R package for Regulatory multi-omics with Deep Mitochondrial mutation profiling

Define a function to perform single-cell based hard porogeny assignment This function was developed based on DN4T2.basics.ipynb

Description

Define a function to perform single-cell based hard porogeny assignment This function was developed based on DN4T2.basics.ipynb

Usage

ProgenyMapping(
  HSC_redeemR = DN4_PhenoHSC_redeemR.verysensitive,
  Full_redeemR = DN4_BMMC_HSPC_HSC_redeemR.verysensitive,
  distCut = 0.95,
  d = "w_jaccard"
)

Arguments

HSC_redeemR	The HSC_redeemR is the redeemR object for defined HSC
Full_redeemR	The FULL_redeemR is the redeemR object for the full BMMC_HSPC_HSC
distCut	Default is 0.95, the distance, below which I define as the related progeny

chenweng1991/scMitoTracing documentation built on July 2, 2024, 8:41 p.m.